BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016C08LP1|AL426982
(946 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1498 1820 0.0
>3x_Contig1498
Length = 12634
Score = 1820 bits (917), Expect = 0.0
Identities = 943/949 (99%), Gaps = 3/949 (0%)
Strand = Plus / Plus
Query: 1 gatccacttgctccaacttaacgttaacatggtacttccccttgaagactaccattgcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4362 gatccacttgctccaacttaacgttaacatggtacttccccttgaagactaccattgcgt 4421
Query: 61 cctgagataaatcaatttctccgaaaaaccaaatatgcattgcccgatcatcatcaccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4422 cctgagataaatcaatttctccgaaaaaccaaatatgcattgcccgatcatcatcaccat 4481
Query: 121 caaagctatctccctttcttaacgggtattcgtatttaaaatctccaacctctctatctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4482 caaagctatctccctttcttaacgggtattcgtatttaaaatctccaacctctctatctg 4541
Query: 181 gattgatcacctctaagagatcacctgtattgaccccaataaacttcaagaaggaatcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4542 gattgatcacctctaagagatcacctgtattgaccccaataaacttcaagaaggaatcaa 4601
Query: 241 atttatcccgtatctttatgggtttcgtacccattctccactgaaataatccagggatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4602 atttatcccgtatctttatgggtttcgtacccattctccactgaaataatccagggatag 4661
Query: 301 tatgccaaccatgagtcctatgatacctcgagtcgttatctcgagtcgcgtcaatgggtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4662 tatgccaaccatgagtcctatgatacctcgagtcgttatctcgagtcgcgtcaatgggtc 4721
Query: 361 ttactacaattcctagtacaccaggatcctggtcttcacaccaaacttcaaacgatttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4722 ttactacaattcctagtacaccaggatcctggtcttcacaccaaacttcaaacgatttaa 4781
Query: 421 cggagggtacttccccagtatcagttttcaacggtattccaaattgttccctgatcattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4782 cggagggtacttccccagtatcagttttcaacggtattccaaattgttccctgatcattt 4841
Query: 481 catgattcgtaaggacagataaacacctcatcttacctagcattttcatttcatcgatgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4842 catgattcgtaaggacagataaacacctcatcttacctagcattttcatttcatcgatgt 4901
Query: 541 tcacacgttgcgcatcatacgctgatagcctatgccatttcctactgggtactaaaggta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4902 tcacacgttgcgcatcatacgctgatagcctatgccatttcctactgggtactaaaggta 4961
Query: 601 tgaaactctcttgtttcttgtacaaaactttataactgatggaaaaccctaaagtgacac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4962 tgaaactctcttgtttcttgtacaaaactttataactgatggaaaaccctaaagtgacac 5021
Query: 661 cgatgatccccgttagcattgctgagaaaaatactttttgacgtcttttcttatgagcac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5022 cgatgatccccgttagcattgctgagaaaaatactttttgacgtcttttcttatgagcac 5081
Query: 721 gtaccgactctgctatagcttgtgc-acatcgtctgccgatgcattaactttggagtcat 779
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5082 gtaccgactctgctatagcttgtgcaacatcgtctgccgatgcattaactttggagtcat 5141
Query: 780 ggtgctggaagaacgtaggaggttttttaatttcattagtctttggatctgtgaaataat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5142 ggtgctggaagaacgtaggaggttttttaatttcattagtctttggatctgtgaaataat 5201
Query: 840 gctttgaatcggtatggttaagcctccgg-taagtwatacaaaacgaggattcaatatcg 898
||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||
Sbjct: 5202 gctttgaatcggtatggttaagccttcggctaagtaatacaaaacgaggattcaatatcg 5261
Query: 899 ataaaacacgaatccggcttataamca-ccctgatcgtgccaaatacat 946
|||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 5262 ataaaacacgaatccggcttataaacacccctgatcgtgccaaatacat 5310
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6223
Number of Sequences: 1807
Number of extensions: 6223
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 946
length of database: 10,358,551
effective HSP length: 16
effective length of query: 930
effective length of database: 10,329,639
effective search space: 9606564270
effective search space used: 9606564270
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)